Instruments Supported by Benchling Connect

Glenwood
Glenwood
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Below is the list of instruments supported by Benchling Connect. Check back regularly as we continue to grow the library of available out-of-the-box data connectors.

We welcome conversations about your specific instrument connectivity needs. Your feedback helps prioritize our roadmap for developing new out-of-the-box instrument data connectors.

If an out-of-the-box connector isn’t available, use Connect builder.

Connect builder is a no-code UI and set of tools that enables you to ingest, map, and transform instrument data into structured results pipelines. Once set up, the integration automatically ingests instrument data into Benchling as part of your scientific workflow.

Connect builder supports:

  • Separator-delimited files: .csv, .txt, .tsv

  • Excel formats: .xls, .xlsx

To get started, upload an example of your instrument’s output file.

For more help, contact your Benchling Account Executive or Customer Success Manager.

Instrument category Manufacturer Instrument name / model Instrument software Software version(s) supported File types supported Connector Type ASM supported? Software configuration guide
Biolayer interferometry

Gator

 Pro High-Throughput
Biolayer Interferometry System

GatorOne 

 2.17

CSV

File-Based

No

 --
Capillary electrophoresis

Agilent

 TapeStation 2200

TapeStation software

 5.1

XML

File-Based

Yes

 Link
TapeStation 4150
TapeStation 42005
Cell counter

Beckman Coulter

 Vi-CELL BLU

Vi-CELL BLU software

 1.3

CSV

File-Based

Yes

 Link
Vi-CELL XR

Vi-CELL XR software

 2.6 TXT, XLS, XLSX File-Based Yes  Link

ChemoMetec

 Nucleocounter NC-200

NucleoView

 1.4 CSV File-Based Yes Link
Nucleocounter NC-202

NC-View

 1.12 CSV File-Based Yes Link

Revvity

 Cellaca MX

Matrix software

 N/A

CSV, XLSX

 File-Based Yes

Link

Roche

 Cedex HiRes

Cedex HiRes software

 2.3.2

CSV

 File-Based Yes

Link
Colony picker

Molecular Devices

  QPix 420

QPix

 N/A CSV File-Based No  Link

QPix 450 / 460
 QPix HT
Data Historian

Aveva

 AVEVA PI System (PI AF Server 2018, Data Archive 3.4.395+)

AVEVA PI

 2.10.11 N/A API-Based (Beta) No Link
dPCR

Bio-Rad

 Bio-Rad ddPCR

QX Manager

 N/A
 		CSV
 		File-Based


 		No


 		 --
QX200 Droplet Digital PCR
QX600 Droplet Digital PCR
QX ONE Droplet Digital PCR System

QX ONE software

 N/A CSV File-Based No --

Qiagen

 QIAcuity 1

QIAcuity software

 2.5
 		CSV File-Based Yes
 		Link
QIAcuity 4
QIAcuity 8

Thermo Fisher Scientific

 AbsoluteQ

AbsoluteQ Digital PCR software

6.2.1

6.3

 CSV File-Based Yes  Link
Electrophoresis Agilent 5200 Fragment Analyzer N/A N/A CSV File-Based No  Link
5300 Fragment Analyzer
5400 Fragment Analyzer
SCIEX BioPhase 8880 BioPhase software N/A CSV File-Based No -- 
ELIspot

CTL

 Immunospot S6 Universal ImmunoSpot software 07 TXT File-Based Yes  Link

Mabtech

 Iris Apex 1.1 XLSX File-Based Yes Link
Flow-Cytometry/FACS

Sartorius

 IntelliCyt Que 3  Forecyt  N/A CSV File-Based No -- 

BD Biosciences

 FACSymphony series FlowJo
 		10.0.7, 10.8.1, 10.10.0
 		WSP
 		File-Based
 		Yes
 		Link
FACSAria series
FACSCelesta

Beckman-Coulter

 CytoFLEX series

Cytek

 Aurora series

Agilent

 NovoCyte series

BD Biosciences

 FACSymphony FACSDiva
 		6.2, 8.0.2
 		XML
 		File-Based
 		Yes
 		Link
FACSAria
FACSVerse
FACSCelesta
Liquid chromatography




 Agilent 1260 Chromeleon software 7.2, 7.3 N/A API-Based Yes Link
Thermo Fisher Scientific Atlas
Dionex-IC ICS-6000
IC-6000
ICS-5000
UltiMate 3000
UltiMate 3000 RSLCnano
Vanquish
VF-P20-A
Agilent 1200 series Empower Software 3.8.1
 		N/A
 		API-Based (Beta)
 		Yes
 		Link
Waters Alliance series
Thermo Fisher Scientific Vanquish series
Shimadzu Nexera series
Cytiva ÄKTA Chromatography Systems Unicorn software 7.3.0.473, 7.6.0.1306, 7.7.0.4016, 7.8.0.2159 ZIP
 		File-Based Yes
 		Link
P9-S
F9-C
GE Frac-950


Liquid handler


 		Beckman Coulter

Biomek FX

Biomek iSeries

 Biomek software 4.1 CSV File-Based Yes Link

Echo 650 Series

 Echo Plate Reformat Software 1.7.2

 		CSV

 		File-Based

 		Yes
 		Link

Echo 525
No Link
Hamilton STARlet  Hamilton software N/A CSV, TXT, XLS File-Based No  --
 Tecan Fluent Fluent Control  N/A CSV, TXT, XLS File-Based No  --
Freedom EVO EVOware N/A CSV File-Based No --
Plate reader

Agilent

 800TS Gen5 3.12 TXT File-Based Yes Link
ELX800
ELX808
Eon
Epoch
Epoch 2
PowerWave HT

Synergy 2
Synergy 4
Synergy H1
Synergy HT
Synergy HTX
Synergy LX
Synergy MX
Synergy Neo
Synergy Neo2

BMG LABTECH

 CLARIOstar MARS
 		4  CSV  File-Based Yes Link
CLARIOstar Plus
PHERAstar FSX
VANTAstar SMART Control
 		6.10 XLSX
 		File-Based Yes Link
CLARIOstar

Meso Scale Diagnostics

 MESO QuickPlex SQ 120 Methodical Mind 1 TXT File-Based Yes Link

Meso Scale Diagnostics

 MESO QuickPlex SQ 120 Discovery Workbench
 		4.0 CSV
 		File-Based Yes
 		Link
MESO SECTOR S 600
SECTOR PR

Molecular Devices

 FlexStation 3 SoftMax Pro
 		7.1.2
 		TXT
 		File-Based Yes
 		Link
SoftMax Pro – Unknown
SpectraMax 190
SpectraMax 340PC384
SpectraMax ABS / ABS Plus
SpectraMax Gemini XPS
SpectraMax i3x
SpectraMax iD3
SpectraMax iD5
SpectraMax L
SpectraMax M5
SpectraMax M Series
SpectraMax Plus 384
VersaMax

Revvity

 EnVision EnVision software 1.14 CSV File-Based Yes Link
EnSight Multimode Reader Kaleido
 		2.0, 3.0, 3.5
 		CSV
 		File-Based Yes
 		 Link
EnVision Nexus
Tecan Sunrise Magellan
 		7.5
 		XLSX File-Based Yes Link
Infinite F50
Infinite M1000
Infinite F500
Tecan Infinite 200/200 Pro Series i-control™ Software N/A XLSX File-Based No Link
Thermo Fisher Scientific Varioskan  SkanIt 07 XLSX File-Based Yes Link

Unchained Labs

 Lunatic Lunatic & Stunner Analysis
 		08 CSV File-Based Yes Link 
Stunner 08 CSV File-Based N/A --

Promega GloMax

 Promega GloMax® Explorer Multimode Microplate Reader GloMax® Control Software N/A XLSX File-Based N/A Link
Plate reader with imaging

Agilent

 Cytation Gen5 Image
 		3.12
 		TXT
 		File-Based Yes
 		Link
Cytation 1
Cytation 3
Cytation 5
Cytation 10
Lionheart FX
Lionheart LX

qPCR

 

Bio-Rad 

 CFX Opus 96 CFX Maestro
 		7.0
 		CSV
 		File-Based Yes
 		Link
CFX Opus Deepwell
CFX Opus 384
CFX Duet
CFX96 Touch
CFX96 Touch Deep Well
CFX384 Touch
CFX Connect
 CFX96 Real-Time System    CFX96 Real-Time System  N/A CSV File-Based No Link 

Thermo Fisher Scientific

 QuantStudio 6 Flex QuantStudio RT-PCR software
 		1.7.2
 		TXT/XLSX
 		File-Based Yes
 		Link
QuantStudio 7 Flex
Viia 7
 7500 Fast Real-Time PCR  QuantStudio Design & Analysis software
 		2.7
 		XLS/XLSX
 		File-Based Yes
 		Link
7500 Real-Time PCR
7900HT Fast Real-Time PCR
QuantStudio 1
QuantStudio 3
QuantStudio 5
QuantStudio 6 Flex
QuantStudio 6 Pro
QuantStudio 7 Flex
QuantStudio 7 Pro
Solution Analyzer

Beckman Coulter

 HIAC 9703+ PharmSpec 03 XLSX File-Based Yes Link
Nova Biomedical BioProfile FLEX2 NovaBio FLEX2 software N/A CSV File-Based Yes Link

Roche

 Cedex Bio HT

Cedex Bio HT software

 06 TXT File-Based Yes Link
Cedex Bio

N/A

 N/A CSV File-Based No Link


Spectrophotometer

 

Thermo Fisher Scientific

 

 

 

 

 

 

 

 

 

 

 

Genesys 30

 Genesys 30 software N/A CSV/TSV File-Based Yes Link

Genesys 40

 Genesys On-Board software
 		3.3
 		CSV
 		File-Based Yes
 		Link

Genesys 50

Genesys 140

Genesys 150

Genesys 180

BioMate 160

NanoDrop 1000

 NanoDrop 1000 software N/A CSV File-Based No Link

NanoDrop 2000

 NanoDrop 2000 software N/A CSV File-Based No  --

NanoDrop 2000/2000c
NanoDrop 8000 NanoDrop 8000 software 2.3 TXT File-Based Yes Link
NanoDrop Eight NanoDrop Eight software 1.6 CSV File-Based Yes Link
NanoDrop One NanoDrop One software 2.11 CSV/XLSX File-Based Yes Link
Qubit 4   Qubit 4 software 2.19 CSV File-Based Yes Link 
Qubit Flex Qubit Flex software 1.9.0 CSV File-Based Yes Link
Genesys 30 VISIONlite
 		5.4 CSV
 		File-Based Yes
 		Link
Genesys 40
Genesys 50
Genesys 140
Genesys 150
Genesys 180
BioMate 160
Evolution 201
Evolution 220
Evolution 260
Bio 350

xMAP
 		Bio-Rad  Bio-Plex 200 Bio-Plex Manager 06 XML File-Based Yes Link 
Luminex
 		100 xPONENT
 		4.3
 		CSV
 		File-Based Yes
 		Link
200
FlexMap 3D
MagPix

 

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