Analyze protein properties

Aarthi
Aarthi
  • Updated

Once you've created or imported a protein, our flexible visualizations provide you with exactly the information you need. You can toggle information about your AA sequence like coloring scheme, Hydrophobicity, and Isoelectric point (pI). 

To access these display features, click on the gear icon located in the upper right hand corner of the sequence map.

You can also access information such as length, Molecular weight and and Isoelectric point (pI) for an AA sequence that you've selected. To do so, navigate to the bottom left hand corner of the workspace.


When performing a protein alignment, you can turn on graphs like hydrophobicity, pI, and % identity by clicking on the gear icon in the upper right hand corner of the alignment. 

A global summary panel is also shown to give you an at-a-glance view of your alignment. To access alignment statistics, scroll to the lower left-hand corner of the alignment. 

You can find information about your protein, like molecular weight, isoelectric point, and extinction coefficient, from the sequence map in the Biochemical Properties tab.

View its biochemical properties with or without translating the first amino acid as methionine by checking or unchecking Translate start codon as methionine.

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