Molecular Biology

Use rich design and analysis tools to annotate sequences, design primers, perform alignments, model assemblies, and more.

Vineet Gopal avatar Somak Das avatar Saif Hakim avatar +9
48 articles in this collection
Written by Vineet Gopal, Somak Das, Saif Hakim and 9 others
Sequences

Import DNA sequences

Import DNA sequences from public databases or from your computer.
Vineet Gopal avatar
Written by Vineet Gopal
Updated over a week ago

View sequences and change display features

Manage the display of a DNA sequence and its features.
Damian Costello avatar
Written by Damian Costello
Updated over a week ago

View properties of a DNA sequence

Highlight sections of DNA to view sequence properties at the bottom of your screen.
Somak Das avatar
Written by Somak Das
Updated over a week ago

Search sequences for features

Navigate to features such as annotations and ORFs, and search sequences for specific bases or regions.
Somak Das avatar
Written by Somak Das
Updated this week

View and analyze translations

Translate a DNA sequence, create an annotation and generate biochemical properties for that translation.
Somak Das avatar
Written by Somak Das
Updated over a week ago

Update the index on a DNA sequence

Update DNA sequence indices to match genomic coordinates
Lauren Shields avatar
Written by Lauren Shields
Updated over a week ago

Send your sequence to NCBI BLAST

Have your sequence or section of your sequence sent out to NCBI BLAST
Stefan Siegfried avatar
Written by Stefan Siegfried
Updated over a week ago

Codon optimize DNA sequences

Use Benchling's nucleotide codon optimization tool for improved protein expression.
Ashoka Rajendra avatar
Written by Ashoka Rajendra
Updated over a week ago

Use parts to design modular sequences

Nest one sequence within another sequence.
Saif Hakim avatar
Written by Saif Hakim
Updated over a week ago

Access and restore an old version of a sequence

Learn how to view a sequence's version history and revert to old versions.
Hoang Ha avatar
Written by Hoang Ha
Updated over a week ago

Share a sequence file

Easily generate a link to share individual sequence files.
Nishant Neel avatar
Written by Nishant Neel
Updated over a week ago

Lock a sequence file

Lock sequence files to prevent accidental edits.
Nishant Neel avatar
Written by Nishant Neel
Updated over a week ago

Export DNA Sequences (.gb, .fasta, .csv, .svg, .rdf, .zip)

Easily export sequence files individually or in bulk
Michael Wu avatar
Written by Michael Wu
Updated over a week ago

Sequences FAQ

Get frequently asked questions about sequence files and manipulations to those files in Benchling.
Lily Helfrich avatar
Written by Lily Helfrich
Updated over a week ago