We support three coloring schemes. The default is RasMol.

Details of the coloring schemes are described below:

  • RasMol: This coloring scheme is traditional, and groups amino acids by property. In general, polar residues are brighter colors, while non-polar residues appear more subdued.
  • Polarity: Yellow means non-polar, green means polar uncharged, red means polar acidic, and blue means polar basic.
  • Hydrophobicity: The residues are colored on a spectrum from red to blue, where red means the most hydrophobic and blue means the most hydrophilic.

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